miRBase entry: mdo-mir-7385i-2

Stem-loop mdo-mir-7385i-2


Accession
MI0040941
Description
Monodelphis domestica mdo-mir-7385i-2 precursor miRNA


Sequence

341 reads, 9 reads per million, 4 experiments
AGGUCAGAUAUUCUGUCUUUCAgugacguuguaaacccugGAACACAGGCUAUCCGACCUGG
(((((.((((.(((((.((((((.(...........))))))).))))).)))).)))))..

Structure
--     A    U     C      u acgu 
  AGGUC GAUA UCUGU UUUCAg g    u
  ||||| |||| ||||| |||||| |    g
  UCCAG CUAU GGACA AAGguc c    u
GG     C    C     C      - caaa 


Annotation confidence High
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Genome context
chrX: 4609054-4609115 [+]
Clustered miRNAs
11 other miRNAs are < 10 kb from mdo-mir-7385i-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-7385i-5p

Accession MIMAT0050375
Description Monodelphis domestica mdo-miR-7385i-5p mature miRNA
Sequence 1 - AGGUCAGAUAUUCUGUCUUUCA - 22
Evidence experimental
Illumina [1]

Mature mdo-miR-7385i-2-3p

Accession MIMAT0050376
Description Monodelphis domestica mdo-miR-7385i-2-3p mature miRNA
Sequence 41 - GAACACAGGCUAUCCGACCUGG - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973