miRBase entry: mdo-mir-12393

Stem-loop mdo-mir-12393


Accession
MI0040930
Description
Monodelphis domestica mdo-mir-12393 precursor miRNA


Sequence

33 reads, 3 reads per million, 4 experiments
cUUCUGGCUCUAAAUACUAUGAGAucacagaaucauaggaucauagaucuagagcuggaaggga
((((((((((((.((.((((((..................)))))))).))))))))))))...

Structure
---            A  A      GAucacag 
   cUUCUGGCUCUA AU CUAUGA        a
   |||||||||||| || ||||||         
   gaaggucgagau ua gauacu        a
agg            c  -      aggauacu 


Annotation confidence Not enough data
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Genome context
chr8: 300336663-300336726 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mdo-mir-12393
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-12393-5p

Accession MIMAT0050355
Description Monodelphis domestica mdo-miR-12393-5p mature miRNA
Sequence 2 - UUCUGGCUCUAAAUACUAUGAGA - 24
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973