miRBase entry: mdo-mir-12388

Stem-loop mdo-mir-12388


Accession
MI0040922
Description
Monodelphis domestica mdo-mir-12388 precursor miRNA


Sequence

9 reads, 1 reads per million, 3 experiments
GCAUCUGGGGAACGUUGGCCUCGUggacgugucaaacgUGGCCUUCUUCUUUGGUGUCC
(((((.((((((.(..((((.(((.((....))..))).))))..))))))))))))..

Structure
--     U      C UU    U   -g  c 
  GCAUC GGGGAA G  GGCC CGU  ga g
  ||||| |||||| |  |||| |||  ||  
  UGUGG UUUCUU C  CCGG gca  cu u
CC     -      - UU    U   aa  g 


Annotation confidence Not enough data
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Genome context
chr7: 260008654-260008712 [-]

Database links

Mature mdo-miR-12388-5p

Accession MIMAT0050342
Description Monodelphis domestica mdo-miR-12388-5p mature miRNA
Sequence 1 - GCAUCUGGGGAACGUUGGCCUCGU - 24
Evidence experimental
Illumina [1]

Mature mdo-miR-12388-3p

Accession MIMAT0050343
Description Monodelphis domestica mdo-miR-12388-3p mature miRNA
Sequence 39 - UGGCCUUCUUCUUUGGUGUCC - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973