miRBase entry: mdo-mir-12380

Stem-loop mdo-mir-12380


Accession
MI0040912
Description
Monodelphis domestica mdo-mir-12380 precursor miRNA


Sequence

4356 reads, 112 reads per million, 4 experiments
UUCCCUCCUACGGCUCUCUGCAgagguaccagaugCAGAGGGAGGAGGUUGGGAUGa
.((((.(((.(..(((((((((...........)))))))))..))))..))))...

Structure
--U    -U   A GG         gagg 
   UCCC  CCU C  CUCUCUGCA    u
   ||||  ||| |  |||||||||    a
   AGGG  GGA G  GGGAGACgu    c
aGU    UU   - GA         agac 


Annotation confidence Not enough data
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Genome context
chr6: 214307233-214307289 [-]

Database links

Mature mdo-miR-12380-5p

Accession MIMAT0050323
Description Monodelphis domestica mdo-miR-12380-5p mature miRNA
Sequence 1 - UUCCCUCCUACGGCUCUCUGCA - 22
Evidence experimental
Illumina [1]

Mature mdo-miR-12380-3p

Accession MIMAT0050324
Description Monodelphis domestica mdo-miR-12380-3p mature miRNA
Sequence 36 - CAGAGGGAGGAGGUUGGGAUG - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973