miRBase entry: mdo-mir-12379

Stem-loop mdo-mir-12379


Accession
MI0040910
Description
Monodelphis domestica mdo-mir-12379 precursor miRNA


Sequence

45 reads, 2 reads per million, 5 experiments
CACGCAGGUAGUGAUGUGUAGGUcucagcgcagcuaccuggaggcgcacaucaaccugcgggg
..(((((((..((((((((..(((((....(((....)))))))))))))))))))))))...

Structure
-CA       AG        AG     agcg   c 
   CGCAGGU  UGAUGUGU  GUcuc    cag u
   |||||||  ||||||||  |||||    |||  
   gcgucca  acuacacg  cggag    guc a
ggg       --        --     ----   c 


Annotation confidence Not enough data
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Genome context
chr6: 157286782-157286844 [-]

Database links

Mature mdo-miR-12379-5p

Accession MIMAT0050322
Description Monodelphis domestica mdo-miR-12379-5p mature miRNA
Sequence 1 - CACGCAGGUAGUGAUGUGUAGGU - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973