miRBase entry: mdo-mir-12297i

Stem-loop mdo-mir-12297i


Accession
MI0040898
Description
Monodelphis domestica mdo-mir-12297i precursor miRNA


Sequence

48 reads, 1 reads per million, 5 experiments
CUUUGCGUGGCGCCUCGUUCUUguucaguuacucucaGAACAAGGAGUCACGCAAAGGA
(((((((((((.(((.(((((...............))))).))).)))))))))))..

Structure
--           G   C     Uguuca 
  CUUUGCGUGGC CCU GUUCU      g
  ||||||||||| ||| |||||      u
  GAAACGCACUG GGA CAAGa      u
AG           A   A     cucuca 


Annotation confidence Not enough data
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Genome context
chr5: 250609828-250609886 [+]

Database links

Mature mdo-miR-12297i-5p

Accession MIMAT0050301
Description Monodelphis domestica mdo-miR-12297i-5p mature miRNA
Sequence 1 - CUUUGCGUGGCGCCUCGUUCUU - 22
Evidence experimental
Illumina [1]

Mature mdo-miR-12297i-3p

Accession MIMAT0050302
Description Monodelphis domestica mdo-miR-12297i-3p mature miRNA
Sequence 38 - GAACAAGGAGUCACGCAAAGGA - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973