miRBase entry: mdo-mir-12356

Stem-loop mdo-mir-12356


Accession
MI0040878
Description
Monodelphis domestica mdo-mir-12356 precursor miRNA


Sequence

96 reads, 3 reads per million, 4 experiments
CCCCGGGGAAAUGAGGAUGUGGcagugaugcuugCUCUCUUCUCUUCUCCGGCACa
..((((((((..(((((.((((((....))).)))..)))))..))))))))....

Structure
--CC        AU     -U   -   g 
    CCGGGGAA  GAGGA  GUG Gca u
    ||||||||  |||||  ||| |||  
    GGCCUCUU  CUUCU  Cgu cgu g
aCAC        CU     CU   u   a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr4: 382856419-382856474 [-]

Database links

Mature mdo-miR-12356-5p

Accession MIMAT0050266
Description Monodelphis domestica mdo-miR-12356-5p mature miRNA
Sequence 1 - CCCCGGGGAAAUGAGGAUGUGG - 22
Evidence experimental
Illumina [1]

Mature mdo-miR-12356-3p

Accession MIMAT0050267
Description Monodelphis domestica mdo-miR-12356-3p mature miRNA
Sequence 35 - CUCUCUUCUCUUCUCCGGCAC - 55
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973