Stem-loop mdo-mir-12354

Accession

MI0040875

Description

Monodelphis domestica mdo-mir-12354 precursor miRNA

Sequence

62 reads, 2 reads per million, 3 experiments

aaUGCCCACAUUGAUGAGAUCACAgaugaauacucaaaaauuugUGAUUUCAAAGAUGUGGGUGUUUu
((((((((((((..(((((((((((((............)))))))))))))..))))))))))))..

Structure

--            GA             gaaua 
  aaUGCCCACAUU  UGAGAUCACAgau     c
  ||||||||||||  |||||||||||||      
  UUGUGGGUGUAG  ACUUUAGUguuua     u
uU            AA             aaaac 

Annotation confidence High

Genome context

chr4: 327821749-327821816 [+]

Mature mdo-miR-12354-5p

• Accession: MIMAT0050260
• Description: Monodelphis domestica mdo-miR-12354-5p mature miRNA
• Sequence: 3 - UGCCCACAUUGAUGAGAUCACA - 24
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-12354-3p

• Accession: MIMAT0050261
• Description: Monodelphis domestica mdo-miR-12354-3p mature miRNA
• Sequence: 45 - UGAUUUCAAAGAUGUGGGUGUUU - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973