miRBase entry: mdo-mir-34d

Stem-loop mdo-mir-34d


Accession
MI0040871
Description
Monodelphis domestica mdo-mir-34d precursor miRNA


Sequence

71266 reads, 0 reads per million, 5 experiments
gAUGGCAGUGGAGUUAGUGAUUGuaggcaguagaauacaAUCAGCUAACUACACUGCCUACAa
...(((((((.((((((((((((((..(....)..)))))))).)))))).))))))).....

Structure
--gAU       G      -        gg a 
     GGCAGUG AGUUAG UGAUUGua  c g
     ||||||| |||||| ||||||||  |  
     CCGUCAC UCAAUC ACUAacau  g u
aACAU       A      G        aa a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr4: 241889198-241889260 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from mdo-mir-34d
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-34d-5p

Accession MIMAT0050252
Description Monodelphis domestica mdo-miR-34d-5p mature miRNA
Sequence 2 - AUGGCAGUGGAGUUAGUGAUUG - 23
Evidence experimental
Illumina [1]

Mature mdo-miR-34d-3p

Accession MIMAT0050253
Description Monodelphis domestica mdo-miR-34d-3p mature miRNA
Sequence 40 - AUCAGCUAACUACACUGCCUACA - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973