miRBase entry: mdo-mir-12347

Stem-loop mdo-mir-12347


Accession
MI0040865
Description
Monodelphis domestica mdo-mir-12347 precursor miRNA


Sequence

57565 reads, 76 reads per million, 5 experiments
AAUACCUGUAGUACUUACCUCaucauuauauucucccgggGAGGUAAGUACUACAGGUAUU
(((((((((((((((((((((.((.............)).)))))))))))))))))))))

Structure
                     a  auuau 
AAUACCUGUAGUACUUACCUC uc     a
||||||||||||||||||||| ||     u
UUAUGGACAUCAUGAAUGGAG gg     u
                     g  cccuc 


Annotation confidence Not enough data
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Genome context
chr4: 183165622-183165682 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mdo-mir-12347
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-12347-5p

Accession MIMAT0050242
Description Monodelphis domestica mdo-miR-12347-5p mature miRNA
Sequence 1 - AAUACCUGUAGUACUUACCUC - 21
Evidence experimental
Illumina [1]

Mature mdo-miR-12347-3p

Accession MIMAT0050243
Description Monodelphis domestica mdo-miR-12347-3p mature miRNA
Sequence 41 - GAGGUAAGUACUACAGGUAUU - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973