miRBase entry: mdo-mir-12308b

Stem-loop mdo-mir-12308b


Accession
MI0040864
Description
Monodelphis domestica mdo-mir-12308b precursor miRNA


Sequence

9 reads, 0 reads per million, 3 experiments
AGUAGGCAGCUUGGUACAGAGGaaagagcacuguaucuggaauuagagaauccagguucaaauccugccUUUGGUACUUACUGCCUAUAUGA
.((((((((...((((((((((...((....((.(((((((.........))))))).))..))...))))).)))))..))))))))....

Structure
---A        CUU     -     aaa  gcac  u       auu 
    GUAGGCAG   GGUAC AGAGG   ga    ug aucugga   a
    ||||||||   ||||| |||||   ||    || |||||||   g
    UAUCCGUC   UCAUG UUUcc   cu    ac uggaccu   a
AGUA        -AU     G     guc  --aa  u       aag 


Annotation confidence Not enough data
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Genome context
chr4: 61378042-61378133 [-]

Database links

Mature mdo-miR-12308b-5p

Accession MIMAT0050240
Description Monodelphis domestica mdo-miR-12308b-5p mature miRNA
Sequence 1 - AGUAGGCAGCUUGGUACAGAGG - 22
Evidence experimental
Illumina [1]

Mature mdo-miR-12308b-3p

Accession MIMAT0050241
Description Monodelphis domestica mdo-miR-12308b-3p mature miRNA
Sequence 70 - UUUGGUACUUACUGCCUAUAUGA - 92
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973