miRBase entry: mdo-mir-7312b

Stem-loop mdo-mir-7312b


Accession
MI0040861
Description
Monodelphis domestica mdo-mir-7312b precursor miRNA


Sequence

1035 reads, 1 reads per million, 5 experiments
AAAGAUAUAUUGCAGAGGaugucaaugaaagaacacCCUCUGCAAUAUAUCUUUCA
((((((((((((((((((.((((.......).))).))))))))))))))))))..

Structure
--                  a   - aa 
  AAAGAUAUAUUGCAGAGG ugu c  u
  |||||||||||||||||| ||| |  g
  UUUCUAUAUAACGUCUCC aca g  a
AC                  c   a aa 


Annotation confidence Not enough data
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Genome context
chr4: 17899133-17899188 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mdo-mir-7312b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-7312b-5p

Accession MIMAT0050237
Description Monodelphis domestica mdo-miR-7312b-5p mature miRNA
Sequence 1 - AAAGAUAUAUUGCAGAGG - 18
Evidence experimental
Illumina [1]

Mature mdo-miR-7312b-3p

Accession MIMAT0050238
Description Monodelphis domestica mdo-miR-7312b-3p mature miRNA
Sequence 37 - CCUCUGCAAUAUAUCUUUCA - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973