miRBase entry: mdo-mir-12346

Stem-loop mdo-mir-12346


Accession
MI0040859
Description
Monodelphis domestica mdo-mir-12346 precursor miRNA


Sequence

11 reads, 0 reads per million, 5 experiments
UGAGCCUUUCUCUCUUAGCUcccaguuaauguucacagcacggGAGGCCCAGAGGGAAGGCUUGAa
.(((((((((.((((..((((((.((...((....))..)))))).))..)))))))))))))...

Structure
--U         U    UA  -    a  uaa  u 
   GAGCCUUUC CUCU  GC Uccc gu   ug u
   ||||||||| ||||  || |||| ||   ||  
   UUCGGAAGG GAGA  CG AGgg ca   ac c
aAG         -    CC  G    -  -cg  a 


Annotation confidence Not enough data
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Genome context
chr3: 514438608-514438673 [-]

Database links

Mature mdo-miR-12346-5p

Accession MIMAT0050233
Description Monodelphis domestica mdo-miR-12346-5p mature miRNA
Sequence 1 - UGAGCCUUUCUCUCUUAGCU - 20
Evidence experimental
Illumina [1]

Mature mdo-miR-12346-3p

Accession MIMAT0050234
Description Monodelphis domestica mdo-miR-12346-3p mature miRNA
Sequence 44 - GAGGCCCAGAGGGAAGGCUUGA - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973