miRBase entry: mdo-mir-12344

Stem-loop mdo-mir-12344


Accession
MI0040856
Description
Monodelphis domestica mdo-mir-12344 precursor miRNA


Sequence

175 reads, 4 reads per million, 5 experiments
cCGGACGGGAUCUGCACGGAGCccuccggucaccgggccugcUGCGUGCGUGUCUCCCGUCCAGg
((((((((((.(((((((.(((..(((((...)))))...))).)))))).)..)))))))).))

Structure
  -        -U -      G   -cc     u 
cC GGACGGGA  C UGCACG AGC   uccgg  
|| ||||||||  | |||||| |||   ||||| c
gG CCUGCCCU  G GCGUGC Ucg   gggcc  
  A        CU U      G   ucc     a 


Annotation confidence Not enough data
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Genome context
chr3: 488132646-488132710 [-]

Database links

Mature mdo-miR-12344-5p

Accession MIMAT0050228
Description Monodelphis domestica mdo-miR-12344-5p mature miRNA
Sequence 2 - CGGACGGGAUCUGCACGGAGC - 22
Evidence experimental
Illumina [1]

Mature mdo-miR-12344-3p

Accession MIMAT0050229
Description Monodelphis domestica mdo-miR-12344-3p mature miRNA
Sequence 43 - UGCGUGCGUGUCUCCCGUCCAG - 64
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973