Stem-loop mdo-mir-30e

Accession

MI0040851

Description

Monodelphis domestica mdo-mir-30e precursor miRNA

Sequence

346323 reads, 6627 reads per million, 5 experiments

UGUAAACAUCCCCGACUGGAAGcuguaagacacagccaagCUUUCAGUCAGAUGUUUGCUGCu
.(((((((((...(((((((((((..............))))))))))).)))))))))....

Structure

---U         CCC           guaaga 
    GUAAACAUC   GACUGGAAGcu      c
    |||||||||   |||||||||||       
    CGUUUGUAG   CUGACUUUCga      a
uCGU         --A           accgac 

Annotation confidence High

Genome context

chr3: 414610855-414610917 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mdo-mir-30e

Mature mdo-miR-30e-5p

• Accession: MIMAT0050218
• Description: Monodelphis domestica mdo-miR-30e-5p mature miRNA
• Sequence: 1 - UGUAAACAUCCCCGACUGGAAG - 22
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-30e-3p

• Accession: MIMAT0050219
• Description: Monodelphis domestica mdo-miR-30e-3p mature miRNA
• Sequence: 41 - CUUUCAGUCAGAUGUUUGCUGC - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973