miRBase entry: mdo-mir-9c-2

Stem-loop mdo-mir-9c-2


Accession
MI0040846
Description
Monodelphis domestica mdo-mir-9c-2 precursor miRNA


Sequence

1635591 reads, 2 reads per million, 5 experiments
UUCGGUUAUCUAGCUUUAUGAagaccaauacacucAUACAGCUAGAUAACCAAAGA
...((((((((((((.(((((............))))).)))))))))))).....

Structure
--UUC            U     agacc 
     GGUUAUCUAGCU UAUGA     a
     |||||||||||| |||||      
     CCAAUAGAUCGA AUAcu     a
AGAAA            C     cacau 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr3: 215711861-215711916 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mdo-mir-9c-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-9c-5p

Accession MIMAT0050101
Description Monodelphis domestica mdo-miR-9c-5p mature miRNA
Sequence 1 - UUCGGUUAUCUAGCUUUAUGA - 21
Evidence experimental
Illumina [1]

Mature mdo-miR-9c-3p

Accession MIMAT0050102
Description Monodelphis domestica mdo-miR-9c-3p mature miRNA
Sequence 36 - AUACAGCUAGAUAACCAAAGA - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973