miRBase entry: mdo-mir-7356b

Stem-loop mdo-mir-7356b


Accession
MI0040796
Description
Monodelphis domestica mdo-mir-7356b precursor miRNA


Sequence

447 reads, 1 reads per million, 4 experiments
GACCCGGCUGCGAGGACCCGGCugcaaagauaggcugcAGGGUCUUGGCUGCAGGGACUU
..(((.((.((.(((((((.((.((........)).)).))))))).)).)).)))....

Structure
--GA   G  U  G       G  u  aaa 
    CCC GC GC AGGACCC GC gc   g
    ||| || || ||||||| || ||    
    GGG CG CG UUCUGGG cg cg   a
UUCA   A  U  G       A  u  gau 


Annotation confidence Not enough data
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Genome context
chr1: 432130349-432130408 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from mdo-mir-7356b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-7356b-5p

Accession MIMAT0050124
Description Monodelphis domestica mdo-miR-7356b-5p mature miRNA
Sequence 1 - GACCCGGCUGCGAGGACCCGGC - 22
Evidence experimental
Illumina [1]

Mature mdo-miR-7356b-3p

Accession MIMAT0050125
Description Monodelphis domestica mdo-miR-7356b-3p mature miRNA
Sequence 39 - AGGGUCUUGGCUGCAGGGACUU - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973