miRBase entry: mdo-mir-12304-2

Stem-loop mdo-mir-12304-2


Accession
MI0040794
Description
Monodelphis domestica mdo-mir-12304-2 precursor miRNA


Sequence

7 reads, 1 reads per million, 2 experiments
aAAUCAGGAUGUUUCCACAGAGCucuucaaggGACUGUGGGAGAUUCUGCUUGA
....((((((.(((((((((..((((...)))).))))))))))))))).....

Structure
-aAAU      G         AG    u 
     CAGGAU UUUCCACAG  Cucu  
     |||||| |||||||||  |||| c
     GUCUUA GAGGGUGUC  Ggga  
AGUUC      -         -A    a 


Annotation confidence Not enough data
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Genome context
chr1: 432014377-432014430 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mdo-mir-12304-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-12304-5p

Accession MIMAT0050120
Description Monodelphis domestica mdo-miR-12304-5p mature miRNA
Sequence 2 - AAUCAGGAUGUUUCCACAGAGC - 23
Evidence experimental
Illumina [1]

Mature mdo-miR-12304-3p

Accession MIMAT0050121
Description Monodelphis domestica mdo-miR-12304-3p mature miRNA
Sequence 33 - GACUGUGGGAGAUUCUGCUUGA - 54
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973