miRBase entry: gga-mir-12281

Stem-loop gga-mir-12281


Accession
MI0040753
Description
Gallus gallus gga-mir-12281 precursor miRNA


Sequence

32 reads, 2 reads per million, 5 experiments
uauuccagcuggggucucucagcacagcuggcugcucgccguucggugcUGCUCCGUCAGACCCAUCAGCAgg
....((.((((((((((..((((((...((((.....))))....)))))).......))))))..)))).))

Structure
uauu  a    --      -----cu      -agc    u 
    cc gcug  gggucu       cagcac    uggc g
    || ||||  ||||||       ||||||    |||| c
    gg CGAC  CCCAGA       GUcgug    gccg u
----  A    UA      CUGCCUC      gcuu    c 


Annotation confidence Not enough data
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Genome context
chr8: 28361180-28361252 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from gga-mir-12281
Name Accession Chromosome Start End Strand Confidence




Database links

Mature gga-miR-12281-3p

Accession MIMAT0050064
Description Gallus gallus gga-miR-12281-3p mature miRNA
Sequence 50 - UGCUCCGUCAGACCCAUCAGCA - 71
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973