miRBase entry: gga-mir-214b

Stem-loop gga-mir-214b


Accession
MI0040752
Description
Gallus gallus gga-mir-214b precursor miRNA


Sequence

767 reads, 5 reads per million, 5 experiments
cUGCCUGUCUGUGCCUGCUGUACaggugagaggauguucugCACAGCAAGUGUAGACAGGCAga
((((((((((((((.((((((.((((...........)))).)))))).)))))))))))))).

Structure
-              C      A    ugag 
 cUGCCUGUCUGUGC UGCUGU Cagg    a
 |||||||||||||| |||||| ||||    g
 gACGGACAGAUGUG ACGACA gucu    g
a              A      C    ugua 


Annotation confidence High
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Genome context
chr8: 4658340-4658403 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from gga-mir-214b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature gga-miR-214b-5p

Accession MIMAT0050062
Description Gallus gallus gga-miR-214b-5p mature miRNA
Sequence 2 - UGCCUGUCUGUGCCUGCUGUAC - 23
Evidence experimental
Illumina [1]

Mature gga-miR-214b-3p

Accession MIMAT0050063
Description Gallus gallus gga-miR-214b-3p mature miRNA
Sequence 42 - CACAGCAAGUGUAGACAGGCA - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973