miRBase entry: gga-mir-10c

Stem-loop gga-mir-10c


Accession
MI0040732
Description
Gallus gallus gga-mir-10c precursor miRNA

Literature search
7 open access papers mention gga-mir-10c
(14 sentences)

Sequence

7481 reads, 179 reads per million, 5 experiments
UACCCUGUAGACUCGAAUUUGUgugagcgucuccgagucgCAAAUUCGUCUCUAGGGGAAUa
...(((.((((..((((((((((....((....))...))))))))))..)))).)))....

Structure
-UAC   G    CU          ugag  u 
    CCU UAGA  CGAAUUUGUg    cg c
    ||| ||||  ||||||||||    ||  
    GGG AUCU  GCUUAAACgc    gc u
aUAA   G    CU          -uga  c 


Annotation confidence Not enough data
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Genome context
chr33: 1093263-1093324 [+]

Database links

Mature gga-miR-10c-5p

Accession MIMAT0050024
Description Gallus gallus gga-miR-10c-5p mature miRNA
Sequence 1 - UACCCUGUAGACUCGAAUUUGU - 22
Evidence experimental
Illumina [1]

Mature gga-miR-10c-3p

Accession MIMAT0050025
Description Gallus gallus gga-miR-10c-3p mature miRNA
Sequence 41 - CAAAUUCGUCUCUAGGGGAAU - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973