miRBase entry: gga-mir-12243

Stem-loop gga-mir-12243


Accession
MI0040706
Description
Gallus gallus gga-mir-12243 precursor miRNA


Sequence

34 reads, 2 reads per million, 5 experiments
UUCAUCCUCCUCAUCUUCGUCCUUGCcuucugcuuguaccgcAGGAAGAAGAGGGGAGGGGAGCa
(((.((((((((.(((((.((((.((...(.....)....)))))).))))))))))))))))..

Structure
--   A        A     G    U  -cuu u 
  UUC UCCUCCUC UCUUC UCCU GC    c g
  ||| |||||||| ||||| |||| ||    | c
  GAG GGGAGGGG AGAAG AGGA cg    g u
aC   -        -     A    -  ccau u 


Annotation confidence Not enough data
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Genome context
chr20: 10004105-10004169 [-]

Database links

Mature gga-miR-12243-5p

Accession MIMAT0049976
Description Gallus gallus gga-miR-12243-5p mature miRNA
Sequence 1 - UUCAUCCUCCUCAUCUUCGUCCUUGC - 26
Evidence experimental
Illumina [1]

Mature gga-miR-12243-3p

Accession MIMAT0049977
Description Gallus gallus gga-miR-12243-3p mature miRNA
Sequence 43 - AGGAAGAAGAGGGGAGGGGAGC - 64
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973