Stem-loop sequence gga-mir-132a

AccessionMI0040692 (change log)
DescriptionGallus gallus miR-132a stem-loop
Literature search

4 open access papers mention gga-mir-132a
(4 sentences)

Stem-loop 
   --         u            g g u 
5'   accguggcu uagauuguuacu u c g
     ||||||||| |||||||||||| | | c
3'   ugguaccga aucugacaaugg g g u
   gc         c            g g g
Get sequence
Deep sequencing
140502 reads, 1.3e+03 reads per million, 5 experiments
Confidence Annotation confidence: high
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Genome context
Coordinates (Gallus_gallus-5.0; GCA_000002315.3) Overlapping transcripts
chr19: 5515203-5515261 [-]
intergenic
Clustered miRNAs
< 10kb from gga-mir-132a
gga-mir-132cchr19: 5515771-5515836 [+]
gga-mir-212chr19: 5515770-5515834 [-]
gga-mir-132bchr19: 5515205-5515263 [+]
gga-mir-132achr19: 5515203-5515261 [-]
gga-mir-2184achr19: 5515026-5515081 [+]
gga-mir-2184bchr19: 5515022-5515080 [-]
Database links

Mature sequence gga-miR-132a-5p

Accession MIMAT0049950
Sequence

1 -  

accguggcuuuagauuguuacu

 - 22

Get sequence
Deep sequencing54827 reads, 5 experiments
Evidence experimental; Illumina [1]

Mature sequence gga-miR-132a-3p

Accession MIMAT0049951
Sequence

38 -  

uaacagucuacagccauggucg

 - 59

Get sequence
Deep sequencing85674 reads, 5 experiments
Evidence experimental; Illumina [1]

References

1
PMID:29079676 "Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation" Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H Genome Res. [Epub prior to print](2017).