miRBase entry: gga-mir-12232

Stem-loop gga-mir-12232


Accession
MI0040687
Description
Gallus gallus gga-mir-12232 precursor miRNA


Sequence

18 reads, 1 reads per million, 2 experiments
UCUGCAGAGCCUCCCAGGAGCAgagcucugacagcugcUGUCCUUCGGUGUCUCUGCUGGU
...((((((.(.((.((((.(((((((.....)))).)))))))..)).).))))))....

Structure
-UCU      C U  -C    G   -    c 
    GCAGAG C CC  AGGA CAg agcu u
    |||||| | ||  |||| ||| |||| g
    CGUCUC G GG  UCCU GUc ucga a
UGGU      U U  CU    -   g    c 


Annotation confidence Not enough data
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Genome context
chr18: 5287314-5287374 [-]

Database links

Mature gga-miR-12232-5p

Accession MIMAT0049940
Description Gallus gallus gga-miR-12232-5p mature miRNA
Sequence 1 - UCUGCAGAGCCUCCCAGGAGCA - 22
Evidence experimental
Illumina [1]

Mature gga-miR-12232-3p

Accession MIMAT0049941
Description Gallus gallus gga-miR-12232-3p mature miRNA
Sequence 39 - UGUCCUUCGGUGUCUCUGCUGGU - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973