miRBase entry: gga-mir-12209

Stem-loop gga-mir-12209


Accession
MI0040657
Description
Gallus gallus gga-mir-12209 precursor miRNA


Sequence

136 reads, 4 reads per million, 2 experiments
AUCAAAGUGAAAGGUCAAGAUUuuaagucauggguugaUCGUGACCUUCUCUUUGUAUU
..(((((.(((.(((((.((((..............)))).)))))))).)))))....

Structure
--AU     U   A     A    uuaagu 
    CAAAG GAA GGUCA GAUU      c
    ||||| ||| ||||| ||||       
    GUUUC CUU CCAGU CUag      a
UUAU     U   -     G    uugggu 


Annotation confidence Not enough data
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Genome context
chr1: 50452619-50452677 [-]

Database links

Mature gga-miR-12209-5p

Accession MIMAT0049885
Description Gallus gallus gga-miR-12209-5p mature miRNA
Sequence 1 - AUCAAAGUGAAAGGUCAAGAUU - 22
Evidence experimental
Illumina [1]

Mature gga-miR-12209-3p

Accession MIMAT0049886
Description Gallus gallus gga-miR-12209-3p mature miRNA
Sequence 39 - UCGUGACCUUCUCUUUGUAUU - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973