miRBase entry: mmu-mir-9b-1

Stem-loop mmu-mir-9b-1


Accession
MI0040640
Description
Mus musculus mmu-mir-9b-1 precursor miRNA

Literature search
208 open access papers mention mmu-mir-9b-1
(1078 sentences)

Sequence

3369435 reads, 2 reads per million, 103 experiments
UUCGGUUAUCUAGCUUUAUGAagacuccacaccacucAUACAGCUAGAUAACCAAAGA
...((((((((((((.(((((..............))))).)))))))))))).....

Structure
--UUC            U     agacuc 
     GGUUAUCUAGCU UAUGA      c
     |||||||||||| |||||       
     CCAAUAGAUCGA AUAcu      a
AGAAA            C     caccac 


Annotation confidence Not enough data
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Genome context
chr3: 88215613-88215670 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from mmu-mir-9b-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmu-miR-9b-5p

Accession MIMAT0049835
Description Mus musculus mmu-miR-9b-5p mature miRNA
Sequence 1 - UUCGGUUAUCUAGCUUUAUGA - 21
Evidence experimental
Illumina [1]

Mature mmu-miR-9b-3p

Accession MIMAT0049836
Description Mus musculus mmu-miR-9b-3p mature miRNA
Sequence 38 - AUACAGCUAGAUAACCAAAGA - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973