Stem-loop sequence csi-MIR535d

AccessionMI0039708 (change log)
DescriptionCitrus sinensis miR535d stem-loop
Literature search

2 open access papers mention csi-MIR535d
(5 sentences)

Stem-loop 
   ---auccuugcccagacucaauac      gcu        ag         a cu  ---    auucg   a 
5'                         aaauuu   ugacaaug  agagagcac c  gu   cagc     ugc a
                           ||||||   ||||||||  ||||||||| |  ||   ||||     ||| a
3'                         uuuaaa   acuguuac  ucucucgug g  ca   gucg     acg u
   ucuguuauaaguugacgaaauucg      -au        ca         c au  ucu    ---ga   g
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Csi_valencia_1.0; GCA_000317415.1) Overlapping transcripts
chr2: 14852789-14852929 [-]
intergenic
Database links

Mature sequence csi-miR535d-5p

Accession MIMAT0048998
Sequence

31 -  

ugacaaugagagagagcacac

 - 51

Get sequence
Evidence experimental; Illumina [1]

Mature sequence csi-miR535d-3p

Accession MIMAT0048999
Sequence

91 -  

gugcucucuaccauugucaua

 - 111

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:28054378 "MicroRNA annotation of plant genomes - Do it right or not at all" Taylor RS, Tarver JE, Foroozani A, Donoghue PC Bioessays. [Epub prior to print](2017).