Stem-loop csi-MIR12110

Accession

MI0039697

Description

Citrus sinensis csi-MIR12110 precursor miRNA

Sequence

gagauagauaguuCUGGGGAGUUGCACCCGGAGUaauuucuucagcuucuuuuuagcguuuuauauuuacCCCGAGUCACAGCUCCCUGGACcgaucuaucuca
(((((((((.(.((((((((((((.((.(((.((((........(((.......))).........)))).))).))..)))))))))))).).))))))))).

Structure

-         a u            -C  C   A    -uuucuuca   uc 
 gagauagau g uCUGGGGAGUUG  AC CGG GUaa         gcu  u
 ||||||||| | ||||||||||||  || ||| ||||         |||  u
 cucuaucua c AGGUCCCUCGAC  UG GCC cauu         cga  u
a         g C            AC  A   C    uauauuuug   uu 

Annotation confidence Not enough data

Genome context

chr9: 17616672-17616775 [-]

Mature csi-miR12110-5p

• Accession: MIMAT0048981
• Description: Citrus sinensis csi-miR12110-5p mature miRNA
• Sequence: 14 - CUGGGGAGUUGCACCCGGAGU - 34
• Evidence: experimental ; Illumina [1]

Mature csi-miR12110-3p

• Accession: MIMAT0048982
• Description: Citrus sinensis csi-miR12110-3p mature miRNA
• Sequence: 71 - CCCGAGUCACAGCUCCCUGGAC - 92
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 28054378
   MicroRNA annotation of plant genomes - Do it right or not at all
   "Taylor RS, Tarver JE, Foroozani A, Donoghue PC"
   Bioessays (2017) 39:1600113