Stem-loop csi-MIR391

Accession

MI0039683

Description

Citrus sinensis csi-MIR391 precursor miRNA

Sequence

gaagcagcaucaacaucaauauguuugccaUGCAGGUGAGAUGAUACCGUCAccgcugcucucuuguuuccgacaggggcuuggcugCCGGAAUCAUUUCUCCCGCGUGagaaaccuuuugcuguguuugugucguguuau
..((((((((.((((((((...((((..(((((.((.((((((((.(((.(((((..(((((..((((...))))))))).))).)).))).)))))))).)).)))))..))))...)))..))))).))))..))))..

Structure

ga    --    c     --   uau    gc     A  U        A   U  -   cu     cu    u 
  agca  gcau aacau  caa   guuu  caUGC GG GAGAUGAU CCG CA ccg  gcucu  uguu  
  ||||  |||| |||||  |||   ||||  ||||| || |||||||| ||| || |||  |||||  |||| c
  uugu  ugug uugug  guu   caaa  GUGCG CC CUUUACUA GGC gu ggu  cgggg  acag  
ua    gc    u     uc   uuc    ga     C  U        A   C  c   -u     --    c 

Annotation confidence Not enough data

Genome context

chr8: 19876125-19876265 [-]

Mature csi-miR391-5p

• Accession: MIMAT0048957
• Description: Citrus sinensis csi-miR391-5p mature miRNA
• Sequence: 31 - UGCAGGUGAGAUGAUACCGUCA - 52
• Evidence: experimental ; Illumina [1]

Mature csi-miR391-3p

• Accession: MIMAT0048958
• Description: Citrus sinensis csi-miR391-3p mature miRNA
• Sequence: 88 - CCGGAAUCAUUUCUCCCGCGUG - 109
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 28054378
   MicroRNA annotation of plant genomes - Do it right or not at all
   "Taylor RS, Tarver JE, Foroozani A, Donoghue PC"
   Bioessays (2017) 39:1600113