Stem-loop csi-MIR858

Accession

MI0039677

Description

Citrus sinensis csi-MIR858 precursor miRNA

Sequence

gcuaugcuugucaagugagcagucuuuugcgaguuaaccuuugcCUCGUUGUCUGUUCGACCUUGaacauacauaug
..((((..((((((((((((((......(((((.(((...))).)))))...)))))))..)))).)))..))))..

Structure

gc    cu   -    --       ucuuuu     u   c 
  uaug  ugu caag  ugagcag      gcgag uaa  
  ||||  ||| ||||  |||||||      ||||| ||| c
  auac  aca GUUC  GCUUGUC      UGCUC guu  
gu    au   a    CA       ---UGU     c   u 

Annotation confidence Not enough data

Genome context

chr2: 13416109-13416185 [+]

Mature csi-miR858-3p

• Accession: MIMAT0048949
• Description: Citrus sinensis csi-miR858-3p mature miRNA
• Sequence: 45 - CUCGUUGUCUGUUCGACCUUG - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 28054378
   MicroRNA annotation of plant genomes - Do it right or not at all
   "Taylor RS, Tarver JE, Foroozani A, Donoghue PC"
   Bioessays (2017) 39:1600113