Stem-loop sequence csi-MIR395c

Accession

MI0039664 (change log)

Description

Citrus sinensis miR395c stem-loop

Literature search

4 open access papers mention csi-MIR395c
(26 sentences)

Stem-loop

   aa  g    --aa  -     u    uc ug                    u      cauuca  ga 
5'   ga gcaa    ga gucag uggu  c  gaguuccuccgagcacuuca uggggu      ga  a
     || ||||    || ||||| ||||  |  |||||||||||||||||||| ||||||      ||   
3'   cu uguu    uu caguc accg  g  cucaaggggguuugugaagu auccca      cu  a
   -c  a    gaca  a     c    uu gu                    c      ---cug  ga 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Csi_valencia_1.0; GCA_000317415.1): chr5: 25604742-25604872 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0039664

Mature sequence csi-miR395c-3p

• Accession: MIMAT0048926
• Sequence: 81 - cugaaguguuugggggaacuc - 101
• Evidence: experimental; Illumina [1]

References

1. PMID:28054378 "MicroRNA annotation of plant genomes - Do it right or not at all" Taylor RS, Tarver JE, Foroozani A, Donoghue PC Bioessays. [Epub prior to print](2017).