Stem-loop sequence csi-MIR395b

Accession

MI0039663 (change log)

Description

Citrus sinensis miR395b stem-loop

Literature search

4 open access papers mention csi-MIR395b
(26 sentences)

Stem-loop

   ugacu  a    -----c        u c  ua         ug         u     acuc 
5'      gc caug      aucaggug c cc  gaguucccc  aacacuuca ugggg    c
        || ||||      |||||||| | ||  |||||||||  ||||||||| |||||    u
3'      cg guac      uaguuuac g gg  cucaagggg  uugugaagu auccc    u
   ---ug  a    ucauua        u a  uc         gu         c     aauu 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Csi_valencia_1.0; GCA_000317415.1): chr7: 2081126-2081246 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0039663

Mature sequence csi-miR395b-5p

• Accession: MIMAT0048924
• Sequence: 31 - guuccccugaacacuucauug - 51
• Evidence: experimental; Illumina [1]

Mature sequence csi-miR395b-3p

• Accession: MIMAT0048925
• Sequence: 71 - cugaaguguuugggggaacuc - 91
• Evidence: experimental; Illumina [1]

References

1. PMID:28054378 "MicroRNA annotation of plant genomes - Do it right or not at all" Taylor RS, Tarver JE, Foroozani A, Donoghue PC Bioessays. [Epub prior to print](2017).