Stem-loop sequence csi-MIR394b

Accession

MI0039662 (change log)

Description

Citrus sinensis miR394b stem-loop

Literature search

4 open access papers mention csi-MIR394b
(11 sentences)

Stem-loop

   -       auuuu     u   u         uuaau   uuuc    uu c 
5'  cagaguc     ggcau cug ccaccuccg     ucu    uuuu  g c
    |||||||     ||||| ||| |||||||||     |||    ||||  |  
3'  gucucgg     ccgua gau gguggaggu     aga    aaag  c c
   u       acaau     c   c         ---uu   uucu    uu a 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Csi_valencia_1.0; GCA_000317415.1): JH999157.1: 292152-292253 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0039662

Mature sequence csi-miR394b-5p

• Accession: MIMAT0048923
• Sequence: 11 - uuggcauucuguccaccucc - 30
• Evidence: experimental; Illumina [1]

References

1. PMID:28054378 "MicroRNA annotation of plant genomes - Do it right or not at all" Taylor RS, Tarver JE, Foroozani A, Donoghue PC Bioessays. [Epub prior to print](2017).