Stem-loop sequence csi-MIR169g

Accession

MI0039642 (change log)

Description

Citrus sinensis miR169g stem-loop

Literature search

5 open access papers mention csi-MIR169g
(12 sentences)

Stem-loop

   ---   u         g    aaugau c    c         ug        gcaagccccuuuccuagaaccuaagcaucauauuuuuagauggcuucacaa 
5'    ucu gcaugugga auga      g ggug agccaagga  acuugccg                                                   u
      ||| ||||||||| ||||      | |||| |||||||||  ||||||||                                                   u
3'    aga uguacacuu uacu      c ccac ucgguuucu  ugaacggc                                                   a
   ucc   u         g    --ccgu u    a         gu        uaauugggauguucacuucgauauuuuaguuugggguucaguuuucugagu 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Csi_valencia_1.0; GCA_000317415.1): chr7: 1615803-1616008 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0039642

Mature sequence csi-miR169g-5p

• Accession: MIMAT0048896
• Sequence: 31 - cagccaaggaugacuugccgg - 51
• Evidence: experimental; Illumina [1]

References

1. PMID:28054378 "MicroRNA annotation of plant genomes - Do it right or not at all" Taylor RS, Tarver JE, Foroozani A, Donoghue PC Bioessays. [Epub prior to print](2017).