Stem-loop sequence csi-MIR166g

Accession

MI0039630 (change log)

Description

Citrus sinensis miR166g stem-loop

Literature search

7 open access papers mention csi-MIR166g
(12 sentences)

Stem-loop

   ---auaucuuucuuucucucaua    a        cu             c      uu   agaa 
5'                        guug ggggaaug  gucugguucgaga cauuca  uga    u
                          |||| ||||||||  ||||||||||||| ||||||  |||    a
3'                        caac ccccuuac  cggaccaggcucu guaagu  acu    g
   uuaacuuaccauuuuguguggaa    c        uu             a      cu   aaaa 

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (Csi_valencia_1.0; GCA_000317415.1): chr9: 5710567-5710700 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0039630

Mature sequence csi-miR166g-5p

• Accession: MIMAT0048878
• Sequence: 29 - gaaugcugucugguucgagac - 49
• Evidence: experimental; Illumina [1]

Mature sequence csi-miR166g-3p

• Accession: MIMAT0048879
• Sequence: 84 - ucucggaccaggcuucauucc - 104
• Evidence: experimental; Illumina [1]

References

1. PMID:28054378 "MicroRNA annotation of plant genomes - Do it right or not at all" Taylor RS, Tarver JE, Foroozani A, Donoghue PC Bioessays. [Epub prior to print](2017).