miRBase entry: dre-mir-29b3

Stem-loop dre-mir-29b3


Accession
MI0039521
Description
Danio rerio dre-mir-29b3 precursor miRNA

Literature search
8 open access papers mention dre-mir-29b3
(84 sentences)

Sequence

542 reads, 87 reads per million, 11 experiments
aGCUGGUUUCAAGUGGUGUUUUAGAgugcugaucaaaugaaucUAGCACCAUUUGAAAUCAGUGUU
.((((((((((((((((((..((((................))))))))))))))))))))))...

Structure
--a                  UU    gugcuga 
   GCUGGUUUCAAGUGGUGU  UAGA       u
   ||||||||||||||||||  ||||        
   UGACUAAAGUUUACCACG  AUcu       c
UUG                  --    aaguaaa 


Annotation confidence High
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Genome context
chr23: 32440125-32440190 [-]

Database links

Mature dre-miR-29b3-5p

Accession MIMAT0048667
Description Danio rerio dre-miR-29b3-5p mature miRNA
Sequence 2 - GCUGGUUUCAAGUGGUGUUUUAGA - 25
Evidence not_experimental

Mature dre-miR-29b3-3p

Accession MIMAT0048668
Description Danio rerio dre-miR-29b3-3p mature miRNA
Sequence 44 - UAGCACCAUUUGAAAUCAGUGUU - 66
Evidence not_experimental

References

  1. PubMed ID: 26473382
    A Uniform System for the Annotation of Vertebrate microRNA Genes and the Evolution of the Human microRNAome
    "Fromm B, Billipp T, Peck LE, Johansen M, Tarver JE, King BL, Newcomb JM, Sempere LF, Flatmark K, Hovig E, Peterson KJ"
    "Annu Rev Genet (2015) 49:213-242