Stem-loop dre-mir-7133

Accession

MI0039519

Description

Danio rerio dre-mir-7133 precursor miRNA

Literature search

1 open access papers mention dre-mir-7133
(1 sentences)

Sequence

111 reads, 20 reads per million, 9 experiments

uggagaccugcucUGGUGUUGUGUGUUAAACUGUAuuccuaaacaacaucuaUAGUUUGAUUCACAGCACAAGAguuugcucucu
.(((((.(.(((((.((((((((.(((((((((((...............))))))))))).)))))))).)))))..).)))))

Structure

u     c -u     G        U           uuccua 
 ggaga c  gcucU GUGUUGUG GUUAAACUGUA      a
 ||||| |  ||||| |||||||| |||||||||||      a
 ucucu g  ugAGA CACGACAC UAGUUUGAUau      c
-     c uu     A        U           cuacaa 

Annotation confidence Not enough data

Genome context

chr8: 10020259-10020343 [+]

Mature dre-miR-7133-5p

• Accession: MIMAT0048664
• Description: Danio rerio dre-miR-7133-5p mature miRNA
• Sequence: 14 - UGGUGUUGUGUGUUAAACUGUA - 35
• Evidence: not_experimental

Mature dre-miR-7133-3p

• Accession: MIMAT0048665
• Description: Danio rerio dre-miR-7133-3p mature miRNA
• Sequence: 53 - UAGUUUGAUUCACAGCACAAGA - 74
• Evidence: not_experimental

References

1. PubMed ID: 26473382
   A Uniform System for the Annotation of Vertebrate microRNA Genes and the Evolution of the Human microRNAome
   "Fromm B, Billipp T, Peck LE, Johansen M, Tarver JE, King BL, Newcomb JM, Sempere LF, Flatmark K, Hovig E, Peterson KJ"
   "Annu Rev Genet (2015) 49:213-242