Stem-loop sequence dre-mir-138-2

AccessionMI0039510 (change log)
DescriptionDanio rerio miR-138-2 stem-loop
Literature search

4 open access papers mention dre-mir-138-2
(9 sentences)

          ca    ag             uc      --  g gg 
5' gauggag  ggac  cugguguugugaa  aggccg  cc u  u
   |||||||  ||||  |||||||||||||  ||||||  || |   
3' cuacuuc  ucug  gaccacaacacuu  uucggc  gg a  g
          ac    -g             -c      au  g aa 
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Deep sequencing
8059 reads, 200 reads per million, 11 experiments
Confidence Annotation confidence: high
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Genome context
Coordinates (GRCz11; GCA_000002035.4) Overlapping transcripts
chr16: 7836257-7836342 [-]
Database links

Mature sequence dre-miR-138-5p

Accession MIMAT0001835
Previous IDsdre-miR-138

14 - 


 - 36

Get sequence
Deep sequencing15786 reads, 12 experiments
Evidence experimental; cloned [1]

Mature sequence dre-miR-138-2-3p

Accession MIMAT0048652

55 - 


 - 75

Get sequence
Deep sequencing163 reads, 4 experiments
Evidence not experimental


PMID:26473382 "A Uniform System for the Annotation of Vertebrate microRNA Genes and the Evolution of the Human microRNAome" Fromm B, Billipp T, Peck LE, Johansen M, Tarver JE, King BL, Newcomb JM, Sempere LF, Flatmark K, Hovig E, Peterson KJ Annu Rev Genet. 49:213-242(2015).