miRBase entry: ocu-mir-3085

Stem-loop ocu-mir-3085


Accession
MI0039487
Description
Oryctolagus cuniculus ocu-mir-3085 precursor miRNA


Sequence

AGGUGCCAUUCCGAGGGCCAGGGUcugauuuuguguugcUCUGGCUGCUAUGGCCCCUC
(((.(((((......(((((((((..(((.....))))))))))))...))))).))).

Structure
-   U     UCCGAG         cu   u 
 AGG GCCAU      GGCCAGGGU  gau u
 ||| |||||      |||||||||  ||| u
 UCC CGGUA      UCGGUCUcg  uug g
C   C     ---UCG         --   u 


Annotation confidence Not enough data
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Genome context
CM000807.1: 46016821-46016879 [-]

Database links

Mature ocu-miR-3085-5p

Accession MIMAT0048609
Description Oryctolagus cuniculus ocu-miR-3085-5p mature miRNA
Sequence 1 - AGGUGCCAUUCCGAGGGCCAGGGU - 24
Evidence experimental
Illumina [1]

Mature ocu-miR-3085-3p

Accession MIMAT0048610
Description Oryctolagus cuniculus ocu-miR-3085-3p mature miRNA
Sequence 40 - UCUGGCUGCUAUGGCCCCUC - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344