miRBase entry: ocu-mir-874

Stem-loop ocu-mir-874


Accession
MI0039470
Description
Oryctolagus cuniculus ocu-mir-874 precursor miRNA


Sequence

CGGCCCCACGCACCAGGGUAAGAgagacucuggcuucCUGCCCUGGCCCGAGGGACCGAC
(((.(((.((..((((((((.(.(((........))))))))))))..)).))).)))..

Structure
--   C   A  CA        A A   acu 
  CGG CCC CG  CCAGGGUA G gag   c
  ||| ||| ||  |||||||| | |||    
  GCC GGG GC  GGUCCCGU C cuu   u
CA   A   A  CC        - -   cgg 


Annotation confidence Not enough data
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Genome context
CM000792.1: 19951768-19951827 [-]

Database links

Mature ocu-miR-874-5p

Accession MIMAT0048575
Description Oryctolagus cuniculus ocu-miR-874-5p mature miRNA
Sequence 1 - CGGCCCCACGCACCAGGGUAAGA - 23
Evidence experimental
Illumina [1]

Mature ocu-miR-874-3p

Accession MIMAT0048576
Description Oryctolagus cuniculus ocu-miR-874-3p mature miRNA
Sequence 38 - CUGCCCUGGCCCGAGGGACCGAC - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344