miRBase entry: ocu-mir-671

Stem-loop ocu-mir-671


Accession
MI0039460
Description
Oryctolagus cuniculus ocu-mir-671 precursor miRNA


Sequence

AGGAAGCCCUGGAGGGGCUGGAGGugauggauguuuuccUCCGGUUCUCAGGGCUCCACC
.(((.((((((..(((((((((((.((.......)).))))))))))))))))))))...

Structure
--A   A      GA           u  ug 
   GGA GCCCUG  GGGGCUGGAGG ga  g
   ||| ||||||  ||||||||||| ||  a
   CCU CGGGAC  UCUUGGCCUcc uu  u
CCA   -      --           u  ug 


Annotation confidence Not enough data
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Genome context
CM000802.1: 12646802-12646861 [+]

Database links

Mature ocu-miR-671-5p

Accession MIMAT0048555
Description Oryctolagus cuniculus ocu-miR-671-5p mature miRNA
Sequence 1 - AGGAAGCCCUGGAGGGGCUGGAGG - 24
Evidence experimental
Illumina [1]

Mature ocu-miR-671-3p

Accession MIMAT0048556
Description Oryctolagus cuniculus ocu-miR-671-3p mature miRNA
Sequence 40 - UCCGGUUCUCAGGGCUCCACC - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344