miRBase entry: ocu-mir-660

Stem-loop ocu-mir-660


Accession
MI0039458
Description
Oryctolagus cuniculus ocu-mir-660 precursor miRNA


Sequence

UACCCAUUGCAUAUCGGAGUUGUaaauucucaaaacACCUCCUGUGUGCAUGGAUUGCA
...((((.((((((.((((.(((...........))).)))).))))))))))......

Structure
---UAC    U      C    U   aaau 
      CCAU GCAUAU GGAG UGU    u
      |||| |||||| |||| |||    c
      GGUA CGUGUG CCUC Aca    u
ACGUUA    -      U    C   aaac 


Annotation confidence Not enough data
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Genome context
CM000811.1: 34242048-34242106 [+]
Clustered miRNAs
7 other miRNAs are < 10 kb from ocu-mir-660
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ocu-miR-660-5p

Accession MIMAT0048551
Description Oryctolagus cuniculus ocu-miR-660-5p mature miRNA
Sequence 1 - UACCCAUUGCAUAUCGGAGUUGU - 23
Evidence experimental
Illumina [1]

Mature ocu-miR-660-3p

Accession MIMAT0048552
Description Oryctolagus cuniculus ocu-miR-660-3p mature miRNA
Sequence 37 - ACCUCCUGUGUGCAUGGAUUGCA - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344