miRBase entry: ocu-mir-509a

Stem-loop ocu-mir-509a


Accession
MI0039438
Description
Oryctolagus cuniculus ocu-mir-509a precursor miRNA


Sequence

ACUCCAGAGAGUGACAAUCAUGuauuauuuaauaUGAUUGAAACCUCUGAGAGUGA
(((((((((.((..(((((((((........)))))))))..))))))).))))..

Structure
--    -     A  GA         auu 
  ACUC CAGAG GU  CAAUCAUGu   a
  |||| ||||| ||  |||||||||    
  UGAG GUCUC CA  GUUAGUaua   u
AG    A     -  AA         auu 


Annotation confidence Not enough data
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Genome context
GL018700.1: 10723771-10723826 [-]

Database links

Mature ocu-miR-509a-5p

Accession MIMAT0048511
Description Oryctolagus cuniculus ocu-miR-509a-5p mature miRNA
Sequence 1 - ACUCCAGAGAGUGACAAUCAUG - 22
Evidence experimental
Illumina [1]

Mature ocu-miR-509a-3p

Accession MIMAT0048512
Description Oryctolagus cuniculus ocu-miR-509a-3p mature miRNA
Sequence 35 - UGAUUGAAACCUCUGAGAGUGA - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344