miRBase entry: ocu-mir-504

Stem-loop ocu-mir-504


Accession
MI0039433
Description
Oryctolagus cuniculus ocu-mir-504 precursor miRNA


Sequence

AGACCCUGGUCUGCACUCUAUCuguaugcauauugaAGGGAGUGCAGGGCAGGGUUUCC
.(((((((.((((((((((.((.(((....))).))..)))))))))).)))))))...

Structure
--A       G          -A  u   u 
   GACCCUG UCUGCACUCU  UC gua g
   ||||||| ||||||||||  || |||  
   UUGGGAC GGACGUGAGG  ag uau c
CCU       G          GA  u   a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
GL018700.1: 1830935-1830993 [-]

Database links

Mature ocu-miR-504-5p

Accession MIMAT0048501
Description Oryctolagus cuniculus ocu-miR-504-5p mature miRNA
Sequence 1 - AGACCCUGGUCUGCACUCUAUC - 22
Evidence experimental
Illumina [1]

Mature ocu-miR-504-3p

Accession MIMAT0048502
Description Oryctolagus cuniculus ocu-miR-504-3p mature miRNA
Sequence 37 - AGGGAGUGCAGGGCAGGGUUUCC - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344