miRBase entry: ocu-mir-382

Stem-loop ocu-mir-382


Accession
MI0039395
Description
Oryctolagus cuniculus ocu-mir-382 precursor miRNA


Sequence

GAAGUUGUUCGUGGUGGAUUCGcuuuacuuaugacgAAUCAUUCACGGACAACACUUUU
...(((((((((((..(((((((.........).))))))..)))))))))))......

Structure
---GAA           UG      - uuu 
      GUUGUUCGUGG  GAUUCG c   a
      |||||||||||  |||||| |   c
      CAACAGGCACU  CUAAgc g   u
UUUUCA           UA      a uau 


Annotation confidence Not enough data
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Genome context
GL019048.1: 142718-142776 [+]
Clustered miRNAs
17 other miRNAs are < 10 kb from ocu-mir-382
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ocu-miR-382-5p

Accession MIMAT0048427
Description Oryctolagus cuniculus ocu-miR-382-5p mature miRNA
Sequence 1 - GAAGUUGUUCGUGGUGGAUUCG - 22
Evidence experimental
Illumina [1]

Mature ocu-miR-382-3p

Accession MIMAT0048428
Description Oryctolagus cuniculus ocu-miR-382-3p mature miRNA
Sequence 37 - AAUCAUUCACGGACAACACUUUU - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344