miRBase entry: ocu-mir-376a

Stem-loop ocu-mir-376a

Accession

MI0039387

Description

Oryctolagus cuniculus ocu-mir-376a precursor miRNA

Sequence

GUAGAUUCUCCUUCUAUGAGUacauuauuuaugauuaAUCAUAGAGGAAAAUCCACGU
((.((((.((((.((((((...(((.....))).....)))))))))).)))).))..

Structure

--  A    C    U      --GUa   u 
  GU GAUU UCCU CUAUGA     cau a
  || |||| |||| ||||||     ||| u
  CA CUAA AGGA GAUACU     gua u
UG  C    A    -      Aauua   u

Annotation confidence Not enough data

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Genome context

GL019048.1: 133845-133902 [+]

Clustered miRNAs

18 other miRNAs are < 10 kb from ocu-mir-376a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ocu-miR-376a-5p

Accession	MIMAT0048412
Description	Oryctolagus cuniculus ocu-miR-376a-5p mature miRNA
Sequence	1 - GUAGAUUCUCCUUCUAUGAGU - 21
Evidence	experimental Illumina [1]

Mature ocu-miR-376a-3p

Accession	MIMAT0048413
Description	Oryctolagus cuniculus ocu-miR-376a-3p mature miRNA
Sequence	38 - AUCAUAGAGGAAAAUCCACGU - 58
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344