miRBase entry: ocu-mir-215

Stem-loop ocu-mir-215


Accession
MI0039349
Description
Oryctolagus cuniculus ocu-mir-215 precursor miRNA


Sequence

UUGACCUAUGAAAUGACAGAUGauauggcuaaauuugUCUGUCAUUUCUGUAGGCCAAUA
(((.(((((((((((((((((((...........)))))))))))))).))))).)))..

Structure
--   A     -              uaug 
  UUG CCUAU GAAAUGACAGAUGa    g
  ||| ||||| ||||||||||||||    c
  AAC GGAUG CUUUACUGUCUguu    u
AU   C     U              uaaa 


Annotation confidence Not enough data
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Genome context
CM000805.1: 52958506-52958565 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ocu-mir-215
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ocu-miR-215-5p

Accession MIMAT0048339
Description Oryctolagus cuniculus ocu-miR-215-5p mature miRNA
Sequence 1 - UUGACCUAUGAAAUGACAGAUG - 22
Evidence experimental
Illumina [1]

Mature ocu-miR-215-3p

Accession MIMAT0048340
Description Oryctolagus cuniculus ocu-miR-215-3p mature miRNA
Sequence 38 - UCUGUCAUUUCUGUAGGCCAAUA - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344