miRBase entry: ocu-mir-181a-2

Stem-loop ocu-mir-181a-2

Accession

MI0039316

Description

Oryctolagus cuniculus ocu-mir-181a-2 precursor miRNA

Sequence

AACAUUCAACGCUGUCGGUGAGUUUgggauuugaaaaaACCACCGACCGUUGACUGUACC
.(((.((((((..(((((((.((((...........))))))))))))))))).)))...

Structure

--A   U      CU       A    ggga 
   ACA UCAACG  GUCGGUG GUUU    u
   ||| ||||||  ||||||| ||||    u
   UGU AGUUGC  CAGCCAC CAaa    u
CCA   C      --       -    aaag

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

GL018699.1: 2614666-2614725 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ocu-mir-181a-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ocu-miR-181a-5p

Accession	MIMAT0048275
Description	Oryctolagus cuniculus ocu-miR-181a-5p mature miRNA
Sequence	1 - AACAUUCAACGCUGUCGGUGAGUUU - 25
Evidence	experimental Illumina [1]

Mature ocu-miR-181a-2-3p

Accession	MIMAT0048277
Description	Oryctolagus cuniculus ocu-miR-181a-2-3p mature miRNA
Sequence	39 - ACCACCGACCGUUGACUGUACC - 60
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344