miRBase entry: ocu-mir-130a

Stem-loop ocu-mir-130a


Accession
MI0039285
Description
Oryctolagus cuniculus ocu-mir-130a precursor miRNA


Sequence

GCUCUUUUCACAUUGUGCUACUgucugcgccuaucacgagCAGUGCAAUGUCAAAAGGGCAU
((((((((.(((((((...((((.((.((.......))))))))))))))).))))))))..

Structure
--        C       GCU    u  g  cc 
  GCUCUUUU ACAUUGU   ACUg cu cg  u
  |||||||| |||||||   |||| || ||  a
  CGGGAAAA UGUAACG   UGAC ga gc  u
UA        C       ---    -  -  ac 


Annotation confidence Not enough data
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Genome context
CM000790.1: 190714203-190714264 [+]

Database links

Mature ocu-miR-130a-5p

Accession MIMAT0048217
Description Oryctolagus cuniculus ocu-miR-130a-5p mature miRNA
Sequence 1 - GCUCUUUUCACAUUGUGCUACU - 22
Evidence experimental
Illumina [1]

Mature ocu-miR-130a-3p

Accession MIMAT0048218
Description Oryctolagus cuniculus ocu-miR-130a-3p mature miRNA
Sequence 41 - CAGUGCAAUGUCAAAAGGGCAU - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344