miRBase entry: ocu-mir-30b

Stem-loop ocu-mir-30b


Accession
MI0039248
Description
Oryctolagus cuniculus ocu-mir-30b precursor miRNA


Sequence

UGUAAACAUCCUACACUCAGCUguaauacaugaauuggCUGGGAGGUGGAUGUUUACGUC
.((((((((((.((.((((((((............))))))))..))))))))))))...

Structure
--U          U  -A        uaaua 
   GUAAACAUCC AC  CUCAGCUg     c
   |||||||||| ||  ||||||||      
   CAUUUGUAGG UG  GGGUCggu     a
CUG          -  GA        uaagu 


Annotation confidence Not enough data
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Genome context
CM000792.1: 150418853-150418912 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ocu-mir-30b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ocu-miR-30b-5p

Accession MIMAT0048152
Description Oryctolagus cuniculus ocu-miR-30b-5p mature miRNA
Sequence 1 - UGUAAACAUCCUACACUCAGCU - 22
Evidence experimental
Illumina [1]

Mature ocu-miR-30b-3p

Accession MIMAT0048153
Description Oryctolagus cuniculus ocu-miR-30b-3p mature miRNA
Sequence 39 - CUGGGAGGUGGAUGUUUACGUC - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344